Re: [gmx-users] Fatal error during lipid bilayer minimization

2012-09-14 Thread Mark Abraham
On 13/09/2012 4:33 PM, Bharath K. Srikanth wrote: Hi I am trying to simulate the self-assembly of course-grained DSPC lipids into a lipid bilayer. I made a box (7.5 x 7.5 x 7.5) containing 128 DSPC lipids, and added 768 molecules of water to the system, and ran a minimization (using em.mdp). The

[gmx-users] Fatal error during lipid bilayer minimization

2012-09-12 Thread Bharath K. Srikanth
Hi I am trying to simulate the self-assembly of course-grained DSPC lipids into a lipid bilayer. I made a box (7.5 x 7.5 x 7.5) containing 128 DSPC lipids, and added 768 molecules of water to the system, and ran a minimization (using em.mdp). The summary of the results is below. Reached the maxim