Re: [gmx-users] Dihedral with parameters set to zero

2008-01-11 Thread Maik Goette
8 19:27:38 +0100 From: David van der Spoel <[EMAIL PROTECTED]> Subject: Re: [gmx-users] Dihedral with parameters set to zero To: Discussion list for GROMACS users Message-ID: <[EMAIL PROTECTED]> Content-Type: text/plain; charset=ISO-8859-1; format=flowed van Bemmelen wrote: OK. Now I&

Re: [gmx-users] Dihedral with parameters set to zero

2008-01-10 Thread van Bemmelen
Hmmm, thanks. An obvious solution, but I had not yet thought of that myself. Well, you know what they say: Een dag niets geleerd is een dag niet geleefd! ;-) >Date: Thu, 10 Jan 2008 19:27:38 +0100 >From: David van der Spoel <[EMAIL PROTECTED]> >Subject: Re: [gmx-users] Dihedral

Re: [gmx-users] Dihedral with parameters set to zero

2008-01-10 Thread David van der Spoel
7;s ignore that for now. but that can be solved by defining two dihedrals with different mult and turn off one and turn on the other. Date: Wed, 09 Jan 2008 20:41:19 +0100 From: David van der Spoel <[EMAIL PROTECTED]> Subject: Re: [gmx-users] Dihedral with parameters set to zero To: Dis

Re: [gmx-users] Dihedral with parameters set to zero

2008-01-10 Thread van Bemmelen
w. >Date: Wed, 09 Jan 2008 20:41:19 +0100 >From: David van der Spoel <[EMAIL PROTECTED]> >Subject: Re: [gmx-users] Dihedral with parameters set to zero >To: Discussion list for GROMACS users >Message-ID: <[EMAIL PROTECTED]> >Content-Type: text/plain; charset=ISO-885

Re: [gmx-users] Dihedral with parameters set to zero

2008-01-09 Thread David van der Spoel
van Bemmelen wrote: Hi guys, Probably too simple for you guys, but I just need to be sure: Am I right if I say that a GROMOS96 proper dihedral with all parameters set to 0 (done automatically by grompp) is exactly equivalent to no proper dihedral at all, both with respect to all the energy term

[gmx-users] Dihedral with parameters set to zero

2008-01-09 Thread van Bemmelen
Hi guys, Probably too simple for you guys, but I just need to be sure: Am I right if I say that a GROMOS96 proper dihedral with all parameters set to 0 (done automatically by grompp) is exactly equivalent to no proper dihedral at all, both with respect to all the energy terms and with respect to