Re: [gmx-users] Difference in hydrogen bonds between different softwares

2011-10-29 Thread Mark Abraham
On 29/10/2011 9:22 PM, larif sofiene wrote: Greeting I'm doing a MD simulation of a monomeric protein and i got different results about hydrogen bonding from what another team has found (they use other MD software ) , for example i find a Hydrogen bound between K 77 - Asp 81 and they find K 7

[gmx-users] Difference in hydrogen bonds between different softwares

2011-10-29 Thread larif sofiene
Greeting I'm doing a MD simulation of a monomeric protein and i got different results about hydrogen bonding from what another team has found (they use other MD software ) , for example i find a Hydrogen bound between K 77 - Asp 81 and they find K 77 - R 82, my question is : Is hydrogen bounding di