Re: [gmx-users] DNA simulation

2012-12-11 Thread Justin Lemkul
On 12/11/12 5:22 AM, delara aghaie wrote: Dear Gromacs users I want to simulate dobule strand DNA using gromacs. I have read that I should use amber forcefield for DNA simulation and I have crossed a web page explaining some parameters which I should change in gromacs package to become comp

[gmx-users] DNA simulation

2012-12-11 Thread delara aghaie
Dear Gromacs users I want to simulate dobule strand DNA using gromacs. I have read that I should use amber forcefield for DNA simulation and I have crossed a web page explaining some parameters which I should change in gromacs package to become compatible with this amber force filed. 1) I wa

Re: [gmx-users] DNA SIMULATION

2009-07-18 Thread David van der Spoel
Morteza Khabiri wrote: Dear gmxuser Does somebody knows how to simulate the DNA in gromacs?? I know it is so general question but I need some hint. Check out the amber force field with gromacs web site. Thanks ___ gmx-users mailing listgmx-use

[gmx-users] DNA SIMULATION

2009-07-18 Thread Morteza Khabiri
Dear gmxuser Does somebody knows how to simulate the DNA in gromacs?? I know it is so general question but I need some hint. Thanks ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search t