Re: [gmx-users] Center of Mass (COM) spacing between protein and ligand

2013-05-13 Thread Justin Lemkul
On 5/13/13 5:33 AM, Arunima Shilpi wrote: Respected Sir many many thanks for your reply to my last mail. I was able able to debug the error Here I have new set of queries.. How much COM spacing should i consider for my protein-ligand interactiom How much total distance I should move along z-a

[gmx-users] Center of Mass (COM) spacing between protein and ligand

2013-05-13 Thread Arunima Shilpi
Respected Sir many many thanks for your reply to my last mail. I was able able to debug the error Here I have new set of queries.. How much COM spacing should i consider for my protein-ligand interactiom How much total distance I should move along z-axis/... and which all conf file should i take