Re: [gmx-users] Ca ion simulation incorporated in protein structure

2012-08-16 Thread Justin Lemkul
On 8/16/12 2:45 PM, ram bio wrote: Dear Gromacs Users, I am trying to simulate a modeled protein -ligand complex in lipid bilayer using Gromacs 4.5.4 with Charmm27 FF. For my project purpose which is to see the effect of substitution of ions (Ca instead of Na ions) in the protein structure on

[gmx-users] Ca ion simulation incorporated in protein structure

2012-08-16 Thread ram bio
Dear Gromacs Users, I am trying to simulate a modeled protein -ligand complex in lipid bilayer using Gromacs 4.5.4 with Charmm27 FF. For my project purpose which is to see the effect of substitution of ions (Ca instead of Na ions) in the protein structure on protein ligand interactions , I have m