Re: [gmx-users] CNT-protein interaction

2007-05-10 Thread George Abadir
Ok, thank you very much. Robert Johnson wrote: Just take the coordinate files for the protein and the nanotube, cat them together and then edit the resulting file. Then you can solvate the composite system using genbox. Bob On 5/10/07, George Abadir <[EMAIL PROTECTED]> wrote: Hi, I have

Re: [gmx-users] CNT-protein interaction

2007-05-10 Thread Robert Johnson
Just take the coordinate files for the protein and the nanotube, cat them together and then edit the resulting file. Then you can solvate the composite system using genbox. Bob On 5/10/07, George Abadir <[EMAIL PROTECTED]> wrote: Hi, I have built a topology file for a protein and a topolgy

[gmx-users] CNT-protein interaction

2007-05-10 Thread George Abadir
Hi, I have built a topology file for a protein and a topolgy file for a carbon naontube. I am trying to combine them by solvating the protein in water and inserting the CNT molecule using the -ci option with genbox. However, when I view the resulting file, I can only see the protein in wat