Re: [gmx-users] About usage of node in mpi calculation

2012-05-31 Thread Justin A. Lemkul
On 5/31/12 12:00 PM, vidhya sankar wrote: Dear justin , Very very thanks for your previous patience reply When i run the mpi calculation using more than one node (each node have 16 processor) which option do i need to use in the following command may i use -npme option? mpirun -np 19 mdrun_mpi_

[gmx-users] About usage of node in mpi calculation

2012-05-31 Thread vidhya sankar
Dear justin ,   Very very thanks for your previous patience reply When i run the mpi calculation using more than one node  (each node have 16 processor)  which option do i need to use in the following command  may i use -npme option? mpirun  -np 19  mdrun_mpi_d  -s toplo.tpr Thanks