Re: [gmx-users] -shell option of g_hbond

2011-09-26 Thread Mark Abraham
On 26/09/2011 5:19 PM, Sajad Ahrari wrote: Dear users how can I use -shell option with g_hbond command? I wish to find h-bonds around a particular atom in a definite distance. how can I introduce the index file and cut off distance to it? See g_hbond -h. You give the radius with -shell and

[gmx-users] -shell option of g_hbond

2011-09-26 Thread Sajad Ahrari
Dear users how can I use -shell option with g_hbond command? I wish to find h-bonds around a particular atom in a definite distance. how can I  introduce the index file and cut off distance to it? regards sajad -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/