[gmx-users] g_sgangle problem

2012-07-28 Thread yousef nademi
there was no problem should i define all the index file to 2 group part and then average from the rezult or should i do something in index file that can solve the problem best regards yousef nademi -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users

Fw: [gmx-users] p_N head group lipid orientation

2012-07-27 Thread yousef nademi
- Forwarded Message - From: yousef nademi To: Justin Lemkul Cc: Sent: Friday, July 27, 2012 10:02 AM Subject: Re: [gmx-users] p_N head group lipid orientation thank you for responding  but i want the figure probability versus P-N vector angle and g_sgangle dont give this output

[gmx-users] p_N head group lipid orientation

2012-07-27 Thread yousef nademi
​hi everybody i want to calculate the P_N orientation of dppc lipid bilayer but in g_angle index file shoud have at least 3 atom but in P_N vector i want to define 2 atom is there anyone know what should i do? -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/lis