Re: [gmx-users] Run test in parallel

Dear Yang, Thank you for your corporation. Regards, Teru 2008/8/7 Yang Ye <[EMAIL PROTECTED]>: > ikedaike wrote: >> >> Dear Yang, >> >> Thank you for your quick reply. >> >> I checked the log files and then found that the mpirun command cannot >&

Re: [gmx-users] Run test in parallel

you start your MPI daemon > or other factors that mdrun could be not running at all. Paste your log > file from eight-core test or just wait for some one has experience with > OpenMPI. > > Regards, > Yang Ye > > ikedaike wrote: >> >> Hi >> >> I bui

[gmx-users] Run test in parallel

Hi I built GROMACS-3.3.3 with GCC-3.4.6 and OpenMPI-1.2.5 on CentOS 4.5(Intel Core2 Duo). I tested with gmxtest-3.3.3 and all tests passed in non-parallel. However, when I tested in parallel, I encountered the following messages. [Use 2 Cores] % ./gmxtest.pl -np 2 all Will test on 2 processors Al