[gmx-users] RNA MD Simulation using GROMACS

Hi all, I want to perform a RNA (Just RNA no protein or DNA included) MD Simulation. Can anybody suggest me what are the general parameters should be used for the RNA MD Simulations. I know that AMBER and CHARMM force field work well for DNA and RNA. i have tried the RNA MD simulat

[gmx-users] Re: gmx-users Digest, Vol 103, Issue 111

; release yet. Portability, reliability, high performance and rapid > time-to-market tend to be mutually exclusive, I'm afraid! > > Mark > > On Fri, Nov 23, 2012 at 10:53 AM, Pruthvi Bejugam >wrote: > > > Hai all, > > > >Can any body suggest

[gmx-users] Query about GPU version of Gromacs

Hai all, Can any body suggest me which is most stable version of GPU-GROMCS. and as far as Gromacs site is concerned currently all the versions are unstable. If there is no stable version for GPU is available then when would a stable version for GPU would be released. and another query