Dear Nizamov,
Thanks for this reply, now it makes more sense.
Best,
Nadir
-Original Message-
From: Nizamov Shawkat <[EMAIL PROTECTED]>
To: Discussion list for GROMACS users
Date: Mon, 16 Jun 2008 09:56:22 +0500
Subject: Re: [gmx-users] basic units: acceleration conflict (revision)
> L
portant point
into account. Please help...
Best,
Nadir
-Original Message-
From: David van der Spoel <[EMAIL PROTECTED]>
To: Discussion list for GROMACS users
Date: Sat, 14 Jun 2008 16:13:03 +0200
Subject: Re: [gmx-users] basic units: acceleration conflict (revision)
CIHAN NADIR
/ps^2, which corresponds to 10^15 m/s^2. So , for instance,
when you set the acceleration in x direction greater than ~10^-7 in the mdp
file, then according to given units, it is not physical."
Sorry for typos.
Best,
Nadir
-Original Message-
From: "CIHAN NADIR KAPLAN" &l
es in the vicinity of unity for most
relevant molecular quantities" (p.7).
Can anyone please explain the logic behind choosing nm/ps^2 ? Any help will be
greatly appreciated.
Best,
Nadir Kaplan
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Dear Mark,
I am doing a simulation of a carbon nanotube (CNT) inside water.
First I am going to describe my problem and then give info about my
simulation setup (initial conditions, parameters, etc.).
My problem is as follows:
(1) I am doing a *.gro file of a *.pdb of a (16,16) CNT, without
Dear Justin,
The reply is below:
I am doing a simulation of a carbon nanotube (CNT) inside water. First I am
going to describe my problem and then give info about my simulation setup
(initial conditions, parameters, etc.).
My problem is as follows:
(1) I am doing a *.gro file of a *.pdb of a
Dear all,
I am doing a simulation of a carbon nanotube (CNT) inside water. First I am
going to describe my problem and then give info about my simulation setup
(initial conditions, parameters, etc.).
My problem is as follows:
(1) I am doing a *.gro file of a *.pdb of a (16,16) CNT, without usi
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