[gmx-users] Re: Hai friends (balu)

If the goal is to simply count the secondary structure, pass the dssp output file through grep "__" dssp_output.xpm | wc Fill in the dssp code for each secondary structure in the underline separately. Grep would extract all characters that fit that pattern and wc would count it. Hope that helps.

Re: [gmx-users] Simulating a particle surface for interaction

Nice! Thank you! > Muhammad Naqvi wrote: > > Hi all, > > Wonderful community here! FAQs andManuals on one side, nothing beats > the advice of experts. Whoever started this forum, thank you. I am > learning a lot. > > > > I have a question of my own. I am

[gmx-users] Simulating a particle surface for interaction with peptides

Hi all, Wonderful community here! FAQs andManuals on one side, nothing beats the advice of experts. Whoever started this forum, thank you. I am learning a lot. I have a question of my own. I am trying to see the interaction of certain surfactants and co-surfactants at a hydrophobic interface. To