Re: [gmx-users] editconf and genbox using method

Thank you very much. Trjconv works fine. Marian On Mon, Mar 9, 2009 at 1:10 PM, Justin A. Lemkul wrote: > > > Mark Abraham wrote: > >> - Original Message - >> From: Nuno Azoia >> Date: Monday, March 9, 2009 21:52 >> Subject: Re: [gmx-users] editconf and genbox using method >> To: Discu

[gmx-users] editconf and genbox using method

Hi, I want to obtain a dodecahedron box to start a simulation of a small peptide. But, even if I use dodecahedron option or octahedron, I obtain a rectangular box. Gromacs version: 4.0.4 compiled on redhat server 5 (I do this after 3.2.1 binaries for MS Windows) Command line that I used: pd