Re: [gmx-users] RMSD, two simulations

nterface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Dr. Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamics Group Am Fassberg 11 D-37077 Göttingen Germany pho

Re: [gmx-users] Newbie question

g/search before posting! > Please don't post (un)subscribe requests to the list. Use thewww > interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Dr. Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computati

Re: [gmx-users] Tee-rex compilation error

btw, the patch will be available in GMX 4 so I didn't bother to go 3.3.3 first. Marcus -- Dr. Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamics Group Am Fassberg 11 D-37077 Göttingen Germany phone: ++49-551-2012312 fax: ++49-551-2012302

Re: [gmx-users] Tee-rex compilation error

be requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Dr. Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamic

Re: [gmx-users] REMD problems

stgmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] >

Re: [gmx-users] eigenvalues as a function of time

gt; gmx-users mailing listgmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROT

Re: [gmx-users] selecting multiple groups while using analysis routines like trjconv

ting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecul

Re: [gmx-users] REMD As A Function of Distance Between 2 Chains

it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamics Group Am Fassberg 11 D-37077 Göttingen Germany phone: ++49-551-2012312 fax: ++49-551-2012302 Email:

Re: [gmx-users] a qiestion about using g_cluster

their cores and then clusterize the loop comformations. Even if I can just switch off the fitting, it will be good enough since I can use other routines to fit first. Fitting the trj first to the core and using g_cluster with -nofit on the core-fitted trj should work. Marcus -- Marcus Kubitzki Max

Re: [gmx-users] a qiestion about using g_cluster

posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamic

Re: [gmx-users] Replica exchange method

osting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamics Group

Re: [gmx-users] REMD in one nodes with two processors

nterface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- Marcus Kubitzki Max Planck Institute for Biophysical Chemistry Computational Biomolecular Dynamics Group Am Fassberg 11 D-37077 Göttingen Germany phone: ++49-551-2012312 fax: ++49-551