Re: [gmx-users] Broken trr-file

2009-03-12 Thread Hansjoerg Jerabek
Mark Abraham wrote: Justin A. Lemkul wrote: Hansjoerg Jerabek wrote: Dear Mark! At first: thanks for your reply. The log file has been witten correctly, and gmxcheck gives me the following warning: Checking file ketamine.t2.trr trn version: GMX_trn_file (double precision

Re: [gmx-users] Broken trr-file

2009-03-11 Thread Hansjoerg Jerabek
since it would take about 3 weeks. Best regards Hansjoerg Jerabek Mark Abraham wrote: Hansjoerg Jerabek wrote: Dear colleagues! I faced a problem while trying to modify a trr-file using trjconv_d: trjconv_d -f ketamine.t2.trr -s ketamine.2.tpr -n bilayer.ndx -o ketamine.2.trr -b 435

[gmx-users] Broken trr-file

2009-03-11 Thread Hansjoerg Jerabek
ource code file: trnio.c, line: 66 *File input/output error: Can not determine precision of trn file* --- It seems that the 4th frame at 43520ps is broken, but I somehow can't get rid of it. Can anybody help me? Best regards Ha