Re: [gmx-users] calculating com-com distances.

2009-04-16 Thread Fernando C
ItemRecord=ON > > Hope it helps, > > Tsjerk > > On 4/14/09, Fernando C wrote: > > Hi Tsjerk and all list! > > > > > You have to use the three vectors from the tricilinic representation > > > to obtain the correct distance in the periodic system. Check PBC

Re: [gmx-users] calculating com-com distances.

2009-04-14 Thread Fernando C
Hi Tsjerk and all list! > You have to use the three vectors from the tricilinic representation > to obtain the correct distance in the periodic system. Check PBC in > Chapter 3 of the manual. I used the length values from rectangular box because I'd want believe that my problem would be solved e

[gmx-users] calculating com-com distances.

2009-04-12 Thread Fernando C
d others 20% my code obtains smaller values. For the calculations I've obtained the vectors for the rectangular box in g_energy, using Box_XX, Box_YY and Box_ZZ options; I didn't use the vectors of the skewed box.) Thanks. Fernando C. Lopes F., PhD student Department of Physics UNESP - S