Hi,
I am sure what exactly you are trying to simulate, but your distances
seem a bit large (8.1 nm) for a small peptide. Having your restraints
_far_ off may cause a crash.
Flemming
On 5 Mar 2008, at 17:16, Grace Li wrote:
Hello,
I am having some trouble using distance restraints. My goal
Dear All,
I was wondering if there is a way to ramp (gradually change) a force
constant during a simulation? For example, I introduce some distance
restraints in my simulation, and I would like the force constant to be
very small initially (to prevent the calculation from crashing), and
slowl
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