Re: [Freesurfer] VirtualBox Block

2015-10-08 Thread haidong wang
Hello,i am a new user of freeesurfer.i am so sorry for nor helping you.Can you do me a favor?Please show me how to use freesurfer mail list.Thanks a lot.Just give me a link to freesurfer mail list ,for example.i will highly appreciate it if you show me more in deail!i am looking forward for your ea

[Freesurfer] Group Analysis with Qdec-- Couldn't find subject 'con_chenchen' in SUBJECTS_DIR

2015-10-08 Thread haidong wang
Hi FS Experts, When I use Qdec for Group Analysis,I come with an error.Here it is. freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer FSFAST_HOME/usr/local/f

Re: [Freesurfer] A potential problem in qdec

2015-10-09 Thread haidong wang
Hi,Chenhf When I use Qdec for Group Analysis,I come with an error.Here it is. freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer FSFAST_HOME/usr/local/freesu

[Freesurfer] Error with Group Analysis using Qdec

2015-10-20 Thread haidong wang
Hi FS Experts, When I use Qdec for Group Analysis,I come with an error.Here it is. freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer FSFAST_HOME/usr/local/f

Re: [Freesurfer] Error with Group Analysis using Qdec

2015-10-25 Thread haidong wang
Yes,'con_chenchen' exists in $SUBJECTS_DIR,/media/work/FC_DATA/ckd-T1. 2015-10-21 11:15 GMT+08:00 Douglas Greve : > Does that subject exist in $SUBJECTS_DIR? > > > On 10/20/15 10:23 PM, haidong wang wrote: > > Hi FS Experts, > When I use Qdec for Group Ana

Re: [Freesurfer] Error with Group Analysis using Qdec

2015-10-26 Thread haidong wang
Thanks a lot. 2015-10-26 10:35 GMT+08:00 Douglas Greve : > can you send your qdec.table.dat? > > > On 10/25/15 9:42 PM, haidong wang wrote: > > Yes,'con_chenchen' exists in $SUBJECTS_DIR,/media/work/FC_DATA/ckd-T1. > > 2015-10-21 11:15 GMT+08:00 Douglas Greve

Re: [Freesurfer] Error when transforming aal.nii to lh.aal.label

2017-04-27 Thread haidong wang
el2label command you have lh.aal.label as the input and > output. Are you overwriting the input and so now it does not match the > original subject? > > > On 04/25/2017 09:23 PM, haidong wang wrote: > > Hello FS experts, > > I want to get the thickness of 90 ROIs of

[Freesurfer] How to edit Fsgdf4G2V about the group.effect.mtx

2017-07-12 Thread haidong wang
Hello FS expert, I have four groups and two covariables. The groups are MCI_P,MCI_S,MCI_R,NC and the covariables are age and education. I want to test the thickness differences of the groups regressing out age and education.My group.effect.mtx is as following with the feedback of error. 1

Re: [Freesurfer] How to edit Fsgdf4G2V about the group.effect.mtx

2017-07-12 Thread haidong wang
:00 Douglas N Greve : > That will compute the main effect of diagnosis. Is that what you want? > > > On 07/12/2017 10:29 AM, haidong wang wrote: > > Hello FS expert, > > I have four groups and two covariables. The groups are > > MCI_P,MCI_S,MCI_R,NC and the cov