Hi,
try "mris_convert input_surface output.asc".
This should work.
Florent
-----
Florent Segonne
PhD Candidate
Stata Center 32-D430 CSAIL MIT
1 617 253 2986
http://people.csail.mit.edu/~fsegonne
-
On Fri, 11 Mar 200
Hello Alex,
This warning message appears during the watershed segmentation process.
The final brain shape is compared to a statistical atlas and the correctness
of the segmentation (of the shape) is evaluated.
It turns out that the validation is often too restrictive and often
generates a usele
htness of the
surface, and to eventually correct it. That should solve some of the problems,
especially those when the cerebellum is removed (or part of it!).
Option -first_temp: with that option, the final deformation uses the
first template deformation as a starting point.
Dear Sasha,
mri_watershed was initially designed to skull strip orig images, without
any preprocessing step, such as intensity normalization or contrast
modification. So, This certainly seems like a reasonable thing to do.
However, mri_watershed might normalize intensities during the
process
Hi Alex,
I think that mri_watershed is 'incorrectly' assuming 1*1*1mmm isotropic
voxels. We'll update the code so that it won't stop there.
Florent
---------
Florent Segonne
PhD Candidate
Stata Center 32-D430 CSAIL MIT
1 617 253 2986
http://
-
Florent Segonne
PhD Candidate
Stata Center 32-D430 CSAIL MIT
1 617 253 2986
http://people.csail.mit.edu/~fsegonne
-
On Thu, 10 Nov 2005, Thomas, Adam (NIH/NIMH) wrote:
I recently noticed that some of my subject's spherical surfaces appears
to
