[Freesurfer] fsaverage

k you in advance! Best, Stacy Chu [EMAIL PROTECTED] This message was sent using IMP, the Internet Messaging Program. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

[Freesurfer] flip functional using tkregister2?

Hi all, I used reg-feat2anat --feat istlevel_FWIO_fmri_NYU_KB_Nov30_06_epi1swap_z2_3.feat --subject FREESURFERRECON_FWIO_fmri_NYU_KB_Nov30_06_20061130.095534.281000_1 and then reg-feat2anat --feat istlevel_FWIO_fmri_NYU_KB_Nov30_06_epi1swap_z2_3.feat --subject FREESURFERRECON_FWIO_fmri_NYU_KB_N

Re: [Freesurfer] flip functional using tkregister2?

ot;, but I would *highly* recommend that you find out whether > you really need one or not and, if so, why. LR orientation can be tricky > to determine, even within the same subject. Are you using nifti? > > > > Stacy Chu wrote: > > >Hi all, > > > >I used > &g

[Freesurfer] registering .gfeat

Hi Doug, I am trying to use reg-feat2anat to project FEAT results onto the FS surface. This works ok (except for some registration problems discussed earlier) for 1st level .feat directories. However, my study consists of two consecutive runs per subject (to allow the subject to take a break), so

Re: [Freesurfer] flip functional using tkregister2?

ly be way off, but it should get things more or less lined > up (to within 45degrees rotation), if not, then that's a problem. > > doug > > > Stacy Chu wrote: > > >Funny, I checked example_func in tkmedit like you said, and it looks fine. > >Attached are scree