ocal/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /home/rlavrador/proj/Freesurfer
MNI_DIR /usr/local/freesurfer/mni
FSL_DIR /usr/share/fsl/5.0/
<...>
I would like to know what I am doing wrong. Some clues?
Regards,
--
Rui Lavrador
Visual Neuroscience L
regards,
2015-03-27 14:10 GMT+00:00 Rui Lavrador :
> Hello,
>
> I'm trying to prepare my diffusion data with track-all -prep but
> "trac-preproc exited with ERRORS"
>
> I think it is related to the FSL instructions, because it gives this
> message in
on data is
DTI with 64 directions.
This happens many times? I need more memory?
Best regards,
--
Rui Lavrador
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The information in this
-- Forwarded message --
From: Rui Lavrador
Date: 2012/7/16
Subject: Re: [Freesurfer] Memory allocation problem trac-all -prior
To: Anastasia Yendiki
Hi Anastasia,
Each diffusion volume has 128x128x60 voxels, and there are 182138 voxels
inside of the brain mask.
Rui
2012/7/12
Hi all,
I think I found the problem. I reduced the number of train files in the
trainlist.txt file and it ran without errors. Maybe I will need more memory
to run with all train files.
thanks
2012/7/16 Rui Lavrador
>
>
> -- Forwarded message --
> From: Rui Lavr
e the output files. When looking at
the created folder “…/Diff001/dpath” there is only one folder “5cpts”, so I
cannot visualize the WM pathways, with freeview, that should be located,
for example at “…/dpath/lh.ilf_AS_avg32_mni_flt/path.pd.nii.gz”
Any suggestions?
--
Rui Lav
