Hi FreeSurfer community,
I have a cluster.mgh file (along with the .annot and .summary) resulting from
correlation analysis of cortical thickness in a group of patients. I can open
it as overlay in freeview but I was wondering if there was any chance to
overlay it to a Broadmann atlas (hopefull
,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday, May 15, 2021 8:59 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Hi FreeSurfer community,
I have a cluster.mgh file (along with the .annot and .summary) resulting from
correlation
, but I looked briefly
and didn't see it, so you can just do it yourself if it would be useful. We'll
probably included it in future releases
Cheers
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday, May 1
nd no, not all of them,
that is an ongoing project for neuroscience!
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday, May 15, 2021 4:56 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Overlay of MGH c
: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Sorry, I don’t know what SimNIBS is (or how you can easily save a sphere in
nifti format). Maybe someone else can comment?
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday
definitely sacrifice accuracy
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday, May 15, 2021 5:56 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Thank you in
list
Subject: [External] Re: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Hi Sara
Why do you need MNI at all? Why not just do it in individual subject space?
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Saturday
ll?
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Sunday, May 16, 2021 5:57 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Hi Bruce,
I can convert the MNI coor
E6356.short__%3BJSUlJSUlJQ%21%21CvMGjuU%21t56cia2idYK-SDP7o2pXZXIaWOe9mS7tXTJ__a2xKnfU0-0EzT28nIdTjHZLb8Xm0kpenHQ%24>).
Matt.
From: on behalf of "Romanella,Sara
(BIDMC - Wilkinson - Neurology SF)"
Reply-To: Freesurfer support list
Date: Sunday, May 16, 2021 at 8:47 PM
To: Freesurfer
...@nmr.mgh.harvard.edu
On Behalf Of Romanella,Sara (BIDMC -
Wilkinson - Neurology SF)
Sent: Sunday, May 16, 2021 9:54 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Overlay of MGH clusters on Broadmann atlas
Dear Matt,
Thanks for sending me this paper. I will read it. I would be
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