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Has anyone had success extracting surfaces of brains with obviously
abnormal surfacespost-surgical or very distorted cortices from tumor
etceven if the extraction is imperfect, is it possible to do with
freesurfer and get something imperfect but
number of times but of course it depends a lot
> on the details of the abnormality so it is hard to give generic advice
>
> cheers
> Bruce
>
> On Fri, 28 Dec 2018, Michael Sughrue
> wrote:
>
> >
> > External Email - Use Caution
> >
> > Has
les you will probably need to fill the
> hole in the wm.mgz to make the topology closer to what we expect it to be.
> For the gliomas it depends on where they are
> cheers
> Bruce
> On
> Tue, 1 Jan 2019, Michael Sughrue wrote:
>
> >
> > External Email - Use C
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Recon all takes the vertices and assigns them to a parcel using the gcs
atlases ... these labelings are the annot files and they are used to
generate the autoparcellated pial surfaces
Because there are 3 atlases in the recon all pipeline... three
p
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Hello
My interest is to create an aparc+aseg file with a combination of a
cortical parcellation with a custom cortical atlas and the subcortical grey
matter components from the standard asegbasically i want to mask and
extract signal from multiple
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Hi just following up on the question...
.does anyone have an idea about why the same two parcellations get dropped
when swapping the atlases out and making an aparc+aseg
On Mon, 14 Jan. 2019, 11:17 pm Michael Sughrue Hello
>
> My interest
