cuda v8 freesurfer git download from today (v6?), gtx1080ti gpus, brief env
recap:
999 cd /usr/local/freesurfer-gpu.git/
1001 export PATH=/usr/local/cuda-8.0/bin:$PATH
1002 export LD_LIBRARY_PATH=/usr/local/cuda-8.0/lib64
1004 make clean
1008 ./setup_configure | tee -a setup_configure
I should have mentioned, i did not do any data dirs step, confused on this,
just hoping to compile gpu code
-Henk
- Reply message -
From: "Meij, Henk"
To: "freesurfer@nmr.mgh.harvard.edu"
Subject: [Freesurfer] cuda compile help
Date: Fri, Nov 17, 2017 6:24 PM
cts/P7/77/SHA256E-s105002--bd8037b6bf7bbb40ea5ca7b831b79cbbe5762d8c98f68b41efaf1a6065ec87f4/SHA256E-s105002--bd8037b6bf7bbb40ea5ca7b831b79cbbe5762d8c98f68b41efaf1a6065ec87f4
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Meij, Henk
Sent: Friday, November
___
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Meij, Henk
Sent: Saturday, November 18, 2017 11:28:09 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] cuda compile help
And that ofcourse was the partial answer, as listed on wiki page, I need to
apply a data dir,, these l
Just wanted to report back a success. I had to do some fixes so hope this helps
anybody.
My gpus are GTX1080Ti and the CPU involved is E5-2620 dual 10 core on this
server.
The vanilla cpu recon-all finished in 7 hours, the gpu run finished in 4.3
hours.
Q: I seem to not have any errors or in
Well, it looks the *_cuda files for mri_glmfit and mri_robust_register and some
others were dropped from the repository. Downloaded fresh copy today but the
files are not there. So no errors.
-Henk
From: Meij, Henk
Sent: Monday, November 27, 2017 11:02:44 AM
