Hi Freesurfers,
I'm trying to selxavg3 my data.
My design includes 6 conditions including a 0 rest condition. 3 contrasts
have been defined using mkcontrast. The analysis too using mkanalysis.
I use this command line :
[/homes/11/chaumon/data] (nmr-std-env) selxavg3-sess -analysis
"Analyse_Simpl
Hi freesurfers,
I've been running isxconcat-sess with this line
chaumon[/homes/11/chaumon/data] (nmr-std-env) isxconcat-sess -sf
subjlist.txt -analysis Analyse_Simple_Confidence -c
High_confidence__Low_confidence_vs_HSF_gabor__LSF_gabor -o AVG08
I was expecting to find a directory called osgm in
SF_gabor__LSF_gabor/tal.ces.nii
>
> You can then use this as input to mri_glmfit passing it with
> the --y option. You can get more help from the FS FAST tutorial. Go to
> the wiki, type "isxconcat-sess" in the Search field, then hit the
> "Text" button.
>
Hi Freesurfers,
I would like to be able to regress out specific time points from my
functionals using FSfast. I thought I should do it with the -extreg option
to mkanalysis-sess but I don't know how to create the required
extregstem_000.bfloat file.
How can I create this file?
Thanks,
Max
___
Sent that earlier but seems like it didn't post. Sorry if it's a second
posting.
Hi Freesurfers,
I would like to be able to regress out specific time points from my
functionals using FSfast. I thought I should do it with the -extreg option
to mkanalysis-sess but I don't know how to create the req
Hi freesurfers,
I'm trying to run an estimation with my last subject and get stuck with a
ERROR: design is ill-conditioned
I can imagine this means that my design misses something bu I can't find
what. Conditions all have events in all runs, time points are equally
spaced.
Here's the log of the se
Hi Freesurfers,
I have an issue with a job I launch on seychelles.
I get this error message:
/usr/local/freesurfer/nmr-std-env: line 98: syntax error near unexpected
token `('
/usr/local/freesurfer/nmr-std-env: line 98: ` set path = ( /usr/pubsw/bin
$path )'
/var/spool/PBS/mom_priv/jobs/1258634.s
