[Freesurfer] --inittp 0 in mri_robust_template

External Email - Use Caution Hi, I have a question regarding the flag -- inittp 0 (no init ) in mri_robust_template. What does ‘no init’ mean in this context and which consequences arise from using this flag? Thank you! Best, Marisa ___

Re: [Freesurfer] error message using mri_robust_template

External Email - Use Caution Hi Martin, Thank you for your email! I will try using FS 7.1.1. I have noticed that using the --inittp 0 option also gets rid of the error described. Do you think this would be an alternative ? I don't mind that it takes longer to converge. Best, Ma

[Freesurfer] starting longitudinal pipeline after mri_robust_template

External Email - Use Caution Hello, I have a question regarding the longitudinal pipeline: Is it possible to start the longitudinal pipeline after a template (using mri_robust_template) has already been created in a separate step? Thank you so much, Marisa

[Freesurfer] lta files longitudinal pipeline

External Email - Use Caution Hi, I have a question about the lta files from the longitudinal pipeline (using the –affine flag). Instead of just one .lta file from each timepoint to the template 3 different .lta files are saved -tp1_to_templ_norm.lta, -tp1_to_templ_affine.lta, -t

[Freesurfer] PhD position in Developmental Cognitive Neuroscience

External Email - Use Caution PhD position in Developmental Cognitive Neuroscience Junior Group Leader Dr. Marisa Nordt in the Clinical Child Neuropsychology Section at RWTH Aachen University Hospital (Aachen, Germany) is currently recruiting a PhD student. Job description Our g