[Freesurfer] Label creation

2016-12-13 Thread Leyton Moscoso, Cristian Eduardo
Hi Freesurfer's experts Is there an easy way to create automatically a circular label with a radius centered on a vertex with predifined RAS/Tailarach coordinates on the fsaverage surface? Thanks Cris ___ Freesurfer mailing list Freesurfer@nmr.mgh.ha

Re: [Freesurfer] Label creation

2016-12-14 Thread Leyton Moscoso, Cristian Eduardo
white On 12/13/16 12:53 PM, Leyton Moscoso, Cristian Eduardo wrote: Hi Freesurfer's experts Is there an easy way to create automatically a circular label with a radius centered on a vertex with predifined RAS/Tailarach coordinates on the fsaverage surface? Thanks

[Freesurfer] Freesurfer parcelations of cortical regions in TrackVis

2017-06-15 Thread Leyton Moscoso, Cristian Eduardo
Hi Freesurfer’s and TrackVis experts I am wondering if there is a way to import cortical parcelations mapped on a T1 image in TrackVis. I tried loading segmentation in TrackVis, but this does not allow me to see all parcelations in T1 as I can be done in Freeview. In TrackVis I need to upload

[Freesurfer] FLAIR data to improve pial surfaces

2019-07-18 Thread Leyton Moscoso, Cristian Eduardo
Dear Freesurfer experts, I want to improve pial reconstruction by using FLAIR images in the pial reconstruction (freesurfer v6.0). Ø recon-all -subject subjectname -FLAIR /path/to/FLAIR_volume -FLAIRpial -autorecon3 T1 was acquired in a 3T Phillips scanner with a isometric voxel size of