ordinate report in the SI axis. If this is the case, is
this stored in freesurfer such that I can get coordinates relative to the
uncropped image or just the offset value for the Z coordinate to compensate for
it?
Thanks,
Jerry Jeyachandra
__
specified coordinates.
Thanks
Jerry Jeyachandra
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The information in this e-mail is intended only for the person to whom it is
addressed. If y
t familiar with methods to relate these to specified coordinates.
>
> Thanks
>
> Jerry Jeyachandra
>
>
>
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The info
inate
when you specify -n it write out surface normals instead of surface
locations. Or you can use Doug's method
cheers
Bruce
On Tue, 9 May 2017, Jerry
Jeyachandra wrote:
>
> Hi Bruce,
>
> Thanks for the response. I've run the operation and have examined the
> output. From
surface normal vector from plial surfaceRAS
coordinate
We don't have a way to compute the exact distance from one vertex to
another along the surface (working on it!). If the distances are small,
then euclidian might work ok.
On 05/10/2017 12:35 PM, Jerry Jeyachandra wrote:
>
> Hi Bruc
ly, I'd like to
extract plial surface coordinates associated with the regions of BOLD
activation.
Thanks,
Jerry Jeyachandra
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Hi Freesurfer team,
I have a compressed nifti file converted from DICOM that I am running through
recon-all. From my understanding first mri_convert is run on the original nifti
file in order to generate 001.mgz which is then averaged across multiple runs
to make rawavg.mgz. Since I'm only usin
