[Freesurfer] problem of using freesurfer

2016-10-02 Thread Hsin-Tsung Lee
Dear freesurfer community I have used the freesurfer v5.30 stable on linux, I want to fusion the CT image and the MRI T1 image. The CT image was signed form the epilepsy patient after the inserted depth electrode surgery. The MR image was sign before the operation. I tried to register

Re: [Freesurfer] problem of using freesurfer

2016-10-03 Thread Hsin-Tsung Lee
et, but we are moving towards having a beta. I'll > leave the registration questions for Doug > cheers > Bruce > > > On Mon, 3 Oct 2016, Hsin-Tsung Lee wrote: > > >> Dear freesurfer community >>I have used the freesurfer v5.30 stable on linux, I

[Freesurfer] Some questions about coordinate systems

2017-01-24 Thread Hsin-Tsung Lee
Dear Freesurfer experts: My project objective is to build 3D reconstruction of brain with inserted electrodes. I want register the Brian volume of CT and MR via freesurfer. The registration result looks great when I used th "mri_coreg" instruction, but when I tried to use the information in