Hi,
I am a new user of freesurfer. Is it possible to do just the volumetric
processing stages without the surface processing stages?
In fact what I want is to segment the subcortical structures.
Is there a command line for this purpose only or should we run all the
recon-all steps?
Thank you
Hi
I’m trying to run free surfer on a set of T1 images.
I tried to do it on one patient first before running it on the whole dataset.
I ran the recon-all with the -all option
I had an error message one minute after it has been launched.
It stopped at the mri_nu_correct.mni.
Could you please advise
