Good morning,
We have been working on Slicer and have been able to read in our stack of
images. I can view them at the desired cross-sections by moving the three
planes at will. But now we would like to be able to generate a 3D volume (in
this case a rectangular prism) that contains all of the
Howdie Bruce,
At this lab (NRIMS in Cambridge, MA; www.nrims.harvard.edu), the machine
provides a stack of images that, when reassembled, can replicate the entity
(i.e., nucleus) being studied. We have been able to read these images into
Slicer as TIFF files as well as in the raw data format p
Greetings,
I am attempting to use FreeSurfer/Slicer to study data from a mass
sprectrometer. To be of use, the segmentation capability of
FreeSurfer/Slicer has to be based on quantitative data, not morphology. It
appears as if FreeSurfer uses a generic mapping of the brain's structure as
a st
Greetings,
The data at this lab initially comes in a RAW data format. When converted to
16-bit TIFF files, the quantitative data is retained.
I recognize that, in order for FreeSurfer to be of use, this data must be
converted to mgz files. However, does the process of converting this
informa
Howdie Doug,
We are interested in studying not the ventricles, per say, but the actual
cells and components of the cells that comprise these ventricles. For
example, cells from a heart, spleen, sperm, or cochlea.
Since we are not using an MRI machine to obtain the images, is FreeSurfer of
no
