[Freesurfer] mritotal and COR files

2004-04-16 Thread F.Musso
Hello "freesurfers", I have a very basic question... Following the tutorial about freesurfer on the FSL home page and also the freesurfer tutorial I try to create the talairach.xfm trasformation file using mritotal. But apparently mritotal don't like the COR format files. I did several trials but

[Freesurfer] Fw: Freesurfer new release

2004-09-13 Thread F.Musso
Hi to all, On the Freesurfer homepage I notice that via 'ftp' it's avaliable a new version of Freesurfer x Linux (26.08.2004). But there's nothing about it neither on the mail list nor on the homepage... It's just a 'beta' version? Cheers Francesco Musso MD Laboratory of Molecular Neuroim

[Freesurfer] bad segmentation [newbie]

2004-09-16 Thread F.Musso
Hi to all, In our last analysis, among 12 subjects after "-stage 1" and "-stage 2" we got only 3 reasonable brain surfaces. Most of the other brains have a very odd shape: -pieces of skull -coharse lack of cortex -holes -bridges -bad cutting planes -cerebellar attachments It seems to be a segmenta

[Freesurfer] Re: bad segmentation [newbie]

2004-09-17 Thread F.Musso
mentation. - Original Message - From: "Bruce Fischl" <[EMAIL PROTECTED]> To: "F.Musso" <[EMAIL PROTECTED]> Cc: <[EMAIL PROTECTED]> Sent: Friday, September 17, 2004 4:08 AM Subject: Re: bad segmentation [newbie] > Hi Francesco, > > thes