[Freesurfer] Fwd: Is it possible to load flatmaps in freeview and draw ROI's on them?

2020-04-07 Thread Devavrat Vartak PhD
Devavrat Vartak, PhD Postdoctoral Researcher Helen Wills Neuroscience Institute and School of Optometry Mailing address: 360 Minor Hall #2020 University of California, Berkeley Berkeley, CA, 94720-2020 USA Website: www.dvartak.com Email: dvar...@berkeley.edu devavratvar...

[Freesurfer] Threshold values changed/modified before display.

2020-04-26 Thread Devavrat Vartak PhD
External Email - Use Caution Hi freesurfer developers!, I am using Freesurfer 6.0 and the latest (freeview -beta) to display overlays on my flat surfaces. I am a novice user of freesurfer and I am a bit confused with how the overlays are displayed / thresholds calculated. My ov

[Freesurfer] circular/cyclic color map for polar data in freeview

2020-05-19 Thread Devavrat Vartak PhD
External Email - Use Caution Hello freesurfer community, I am trying to setup a retinotopy pipeline. I have analysed pRF data generating polar angle and eccentricity maps which I project onto an inflated surface / flattened surface in freeview. Is there a way to display a circula