[Freesurfer] Tracula: Calculation of MD values from other eigenvectors

2020-10-21 Thread Chong, Catherine (Cat), Ph.D.
External Email - Use Caution Dear Tracula Experts, We are trying to address a question from a reviewer who is wondering why we included all of the average diffusion parameters in our model ( i.e. FA, MD,FA, RD, and AD) for distinguishing two groups of patients . The reviewer c

Re: [Freesurfer] [EXTERNAL] Re: Tracula: Calculation of MD values from other eigenvectors

2020-10-27 Thread Chong, Catherine (Cat), Ph.D.
ct. Best, Anastasia. From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Chong, Catherine (Cat), Ph.D. Sent: Wednesday, October 21, 2020 1:17 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Tracula: Calculation of MD values from other eigenvectors External

[Freesurfer] Dracula 7.2 -bedp error

2021-10-21 Thread Chong, Catherine (Cat), Ph.D.
External Email - Use Caution Dear Tracula team, I am running 7.2 on a computing cluster and the -prep stage completes without error. The dmri directory show the following files, below. However, after running the second step ( -bedp), the files under dmri.bedpostX do not appear

Re: [Freesurfer] [EXTERNAL] Re: Tracula 7.2 -bedp error

2021-10-21 Thread Chong, Catherine (Cat), Ph.D.
path/to/your/tracula/dir/subjname/dmri On a separate note: I have to do some emergency travel so I will not be monitoring the list through the next week. From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Chong, Catherine (Cat), Ph.D. Sent: Thursday, O