[Freesurfer] confusion with tkregister2

Morning all, I ran the recon yesterday, and it says it ran without error. I am now running tkregister2, but for some reason when i compare the coronal view, things look okay on the mri, but it looks like the axial view for the CT. I'm not sure in which step this happened? Thanks, Mia

Re: [Freesurfer] confusion with tkregister2

urfer-boun...@nmr.mgh.harvard.edu] on behalf of Borzello, Mia Sent: Tuesday, May 15, 2012 9:56 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] confusion with tkregister2 Morning all, I ran the recon yesterday, and it says it ran without error. I am now running tkregister2, but for some reason when i c

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