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Greetings,
I am running recon-all as per the iElvis pipeline with:
recon-all -s -i $SUBJECTS_DIR/.../T1.nii -all -localGI
And followed by ct2mri
My questions are:
1. What is the actual output "space" of the resulting T1.nii and
postInPre.nii ? Does r
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I have a head CT comprised of 186 .tiff files from the original study. I
converted these files to .nii by using MRIcroGL's TIFF->DICOM converter,
and now tried using mri_convert -rl to get it into fs space. However, I get
the errors:
error: No such fil
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I'm looking to merge the aparc+aseg.mgz with outputs from additional seg
steps such as ThalamicNuclei (e.g.,
ThalamicNuclei.v13.T1T2.FSvoxelSpace.mgz)
I see in history there used to be a function mergeseg, but maybe doesn't
exist anymore?
I also foun
