Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC

2025-04-09 Thread Billah, Tashrif
We have always untarred up to 7.1.0 and used it successfully. This was the good thing about FreeSurfer that did not require a client side installation. I am the administrator and I can tell you that installation of this software via root is infeasible for 100 computers. Given your comment about

Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC

2025-04-09 Thread Billah, Tashrif
I just checked that the only additional step you recommend is: > apt-get install ./freesurfer_ubuntu22-7.4.1_amd64.deb Sourcing the rest have remained the same. So why can you not also upload the tar ball? -Tashrif From: Billah, Tashrif Sent: Wednesday, April 9,

Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC

2025-04-09 Thread fsbuild
External Email - Use Caution  It’s not practical for us to support freesurfer running on a system w/o a successful install via the rpm or deb file freesurfer installers, i.e., the tar archives were not installers.   Use of the installer packages is the standard way to help ensur

Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC

2025-04-09 Thread fsbuild
External Email - Use Caution  We are no longer supporting or releasing tar archives for the reasons explained in the previous email. Various sites install freesurfer package(s) on central machine(s)  for everyone to use/mount read only over the network in order to avoid installi

[Freesurfer] Hypothalamic subunits segmentation yields different results in versions 7.2.0 and 7.4.1

2025-04-09 Thread Maria Paternina Die
External Email - Use Caution Dear all, I am running the mri_segment_hypothalamic_subunits module on a longitudinal dataset. As a quality control step, I have been removing those subjects for whom the output volume of any subunit is exactly zero, assuming that the segmentation fail