We fixed ‘-nonuintensitycor’ as you suggested – adding an else clause to
if($DoNuIntensityCor), recon-all line 2107.
if($DoNuIntensityCor) then
…
else
# link nu.mgz to orig.mgz
pushd $subjdir/mri
rm -f nu.mgz
ln -sf orig.mgz nu.mgz
popd
endif
From: Jeffrey Spielberg
Sent: Tues
External Email - Use Caution
where the license.txt
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Hi Xuesong,
Sorry this took a bit of digging.
surf2vol binary from fem_elastic is in the 8.0.0 linux releases, but
unfortunately you will not find it in the Mac arm64 version. Do you have access
to any linux computers? Or you could try to go back to an earlier version on
the Mac.
Best, Lilla
External Email - Use Caution
Hi Simone,
Based on your other recent question, I would recommend running samseg the
way it is documented here:
https://secure-web.cisco.com/1J42u65oQ1VRxZxUyRLQ0WfsPO92xbqHhvftl-50s4v7BtSkaxkqj9Uth8zkhUbE5ltPY6CmgzIx_1mP4ycP1j7W8fDqhKLTDHkGmI-DqSRGDb
