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Hi all - just wondering if any workaround had been identified for this
error. I'm reattaching the recon-all.log in case it's helpful
On Wed, Mar 19, 2025 at 9:51 AM Jeffrey Spielberg wrote:
> Yup - here you go
>
> On Wed, Mar 19, 2025 at 9:14 AM Jef
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I'm attempting to run freesurfer 8 on debian 12.
Are there any tips on making the Ubuntu package work on debian?
or
Is there a freesurfer 8 docker container out there?
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Hi Carly,
Can you be more specific about the missing values, the bug, and the script that
you patched?
Thanks.
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Carly McIntyre-Wood
Sent: Tuesday, April 1, 2025 12:16 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] F
I’m afraid that recon-all can’t be run with ‘-nonuintensitycor’ specified.
From: Jeffrey Spielberg
Sent: Tuesday, April 1, 2025 9:41 AM
To: freesurfer@nmr.mgh.harvard.edu; Huang, Yujing
Subject: Re: Error using -nonuintensitycor
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Hi all - just wondering if a
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Hi there,
I have run FS8.0 on around 200 participants and, upon generating my stats, came upon the known bug. I have since run the patch script and it is now working.
Is there a quicker way to generate those missing values than rerunning autorec
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I'm confused: -nonuintensitycor is listed as an option in the recon-all
help, and recon-all does accept it as an argument (i.e., on line 6575 of
recon-all, which is relevant for line 2050 and after). So it seems to me
that there must be a bug in 1 of t
