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Hello developers
I am encountering unexpected cortical thickness values in the following regions:
lh_G_Ins_lg_and_S_cent_ins_thickness
lh_S_intrapariet_and_P_trans_thickness
lh_S_oc_middle_and_Lunatus_thickness
lh_S_oc-temp_med_and_Lingual_thickne
Dear FreeSurfer Team,
I am working with two timepoints for a subject and attempting to create a
template for samseg-long using mri_robust_template. However, I encountered an
error related to voxel size mismatch between the input images. Both timepoint
images are T1W.
The command I ran is:
mri_r
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Hi:
I tested all the commands that you told me, but, I still have the error
that I had specified to you:
"gonzalorojascosta@gonzalobrain:~$ freeview
This application failed to start because no Qt platform plugin could be
initialized. Reinstalling th
External Email - Use Caution
Try running the bash shell i.e., exec a new bash shell in the terminal
window,$ bash
I assume you installed the .deb
file,https://secure-web.cisco.com/1vpMI_roAst1mdZTXwOe7ZmxVcxxk_NPabzpPTF6ZK_8_jqEimjc64L_Ig6_RszCH9J_9tmhJFLTYpH_46UGjPafSWe6DP09Q0P
External Email - Use Caution
Hi Yujing,
Many thanks for your reply! The email didn’t come through to my inbox and I
just found it in the online archive.
Regarding the coordinate conversion, I had a look at the link but didn’t find
MNI 305 related information. It would be very h
Freesurfer fsaverge is in MNI305 space. Try
mri_label2label --srcsubject <> --srclabel <.label> --trgsubject fsaverage
--trglabel --hemi rh --regmethod surface
These are some helpful links
https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems
https://surfer.nmr.mgh.harvard.edu/fswiki/mri_l
