[Freesurfer] Image filter

2023-01-10 Thread Ruifeng Dong
External Email - Use Caution Dear Freesurfer community, I wonder if Freesurfer uses any filter to deal with the noise in the image, before segmentation. If so, is the filter spatially local or nonlocal? Thanks. Best, Ruifeng ___ Freesu

[Freesurfer] mri_mask error exits returns a zero exit status

2023-01-10 Thread Aaron Tanenbaum
External Email - Use Caution Hello, FYI, I recently noticed that mri_mask returns a zero exit status when it is unable to write the output. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailma

Re: [Freesurfer] mri_mask error exits returns a zero exit status

2023-01-10 Thread Aaron Tanenbaum
External Email - Use Caution I should have said I am using FS 7.3 on Ubuntu 20.04 On Tue, Jan 10, 2023 at 12:23 PM Aaron Tanenbaum < aaron.b.tanenb...@gmail.com> wrote: > Hello, > FYI, I recently noticed that mri_mask returns a zero exit status when it > is unable to write the ou

Re: [Freesurfer] mri_mask error exits returns a zero exit status

2023-01-10 Thread fsbuild
External Email - Use Caution Just curious what output (if any) is echoed to the terminal when the failure occurs. - R. On Jan 10, 2023, at 13:23, Aaron Tanenbaum wrote:External Email - Use CautionHello,FYI, I recently noticed that