[Freesurfer] pass code virtual machine Free Surfer

External Email - Use Caution Hi, I am installing the virtual machine to run Free Surfer on my windows computer and I need the pass code to open the 7zip files archive. Can someone please send that to me? Thank you very much! Best, Luisa Klahn ___

[Freesurfer] Three year postdoctoral fellowship in large-scale neuroimaging of thalamus and brainstem nuclei in brain disorders at the Norwegian Centre for Mental Disorders Research (NORMENT)

External Email - Use Caution NORMENT runs a multicenter study involving hospital departments in Oslo and several research groups at the University of Oslo. The purpose of the programme is to study how biological/genetic, psychological and environmental factors contribute to ment

Re: [Freesurfer] Follow Up License Freesurfer 5.3 Ubuntu

External Email - Use Caution Hi! Would it be possible to obtain a license file for Freesurfer v5.3 that is compatible with the glibc versions on newer Linux systems? That would go a long way in resolving our issues. Thank you, Caspar __

[Freesurfer] Running v7 with recon-all v6 files

External Email - Use Caution Hi I ran recon-all on an external server using the version 6. I recently downloaded the v6 on my Mac v12.6. I was able to set a home directory but get a ‘permission denied’ error when typing ‘$FREESURFER_HOME’ (but have the permissions/sudo). I also

Re: [Freesurfer] SAMSEG - modification of the template files

External Email - Use Caution Would providing better manual segmentations of those structures of interest help you in building better solutions? I can work with the segmentation that is produced now, but I am interested in improving the results for extracerebral tissues using multim

Re: [Freesurfer] [EXTERNAL] Re: Longitudinal PET analysis

External Email - Use Caution That is what I´m planning to do. Actually since some subjects have more than 2 time-points I was thinking that calculating slopes rather than pair-diff may be a better option. Can I use long_mris_slopes with --do-spc (etc…) in my mapped PET images to

Re: [Freesurfer] Follow Up License Freesurfer 5.3 Ubuntu

External Email - Use Caution I can check to see if there is a license in the Freesurfer v5 Ubuntu VM I mentioned in the previous email and send it to you to try.   But per my last email, I don’t know a way to decode an old license on newer versions of the OS where glibc has been

Re: [Freesurfer] Running v7 with recon-all v6 files

External Email - Use Caution Hello Alexandra Please let us know if you are on an Intel or a newer Mac with an arm processor, e.g., M1, M2 chip.  You could send along a screen shot of what "About this Mac" displays. Per the "Important Note" at the bottom of the freesurfer release

Re: [Freesurfer] Error

External Email - Use Caution Hello Ahmed, Command terminated by signal 9 can mean you ran out of memory.  I would try allocating more memory to the VM.  But you may still run out of memory depending upon what is available on your machine. If you do not have to use 7.1.1 and can s