[Freesurfer] longitudinal LME stats

2021-08-11 Thread Erik O'Hanlon
External Email - Use Caution Dear FS experts, I have run the longitudinal pipeline on a dataset with three timepoints. I am particularly interested in the longitudinal hippocampal and amygdala data and want to run LME on these. I've made the qdec table with the id age, sex and t

[Freesurfer] error running samseg on cluster

2021-08-11 Thread Ritobrato Datta
External Email - Use Caution Hi All, I am trying to run samseg as follows on a cluster and am getting a message that I need to install tensorflow (which is already installed). Please see below. Please advise how to fix this. Many thanks Rito -