Re: [Freesurfer] Brodmann area labels

2020-06-26 Thread Peng Liu
External Email - Use Caution Not exactly. I can successfully create a nifti mask with this exvivo label, and the brain area it highlighted is correct from observation. But when I try to employ this mask to ROI analysis. The results I got are exactly the same, with and without this

Re: [Freesurfer] Brodmann area labels

2020-06-26 Thread Fischl, Bruce
Hi Peng In general you need to give us a lot more information. What ROI analysis are you doing? What command did you type? What was the screen output of it? That kind of thing Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Peng Liu Sent: Friday, June 26, 2020 4:51 AM

[Freesurfer] Question regarding MRIread

2020-06-26 Thread Franziska Klein
External Email - Use Caution Hello, I am using the isosurface() function in order to create a mesh based on the T1.mgz and on the ribbon.mgz. I need those meshes for the coregistration of some channels. After coregistration I do project the channels onto the cortex and extrac