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Hello FreeSurfer experts,
I'm planning to run QDEC on Schizophrenia and controls. To do that I ran
recon-all for few subjects in 2 different systems. Both systems have ubuntu
16.04 OS but different freesurfer versions. One is using FS version6 and
othe
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You should never mix FreeSurfer versions according to the FAQ, see
https://surfer.nmr.mgh.harvard.edu/fswiki/UserContributions/FAQ#Q.CanIrunsomecasesinmydatasetusingoneversionofFreeSurferandothersusingadifferentversionofFreeSurfer.3F
Best,
Tim
> On
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Dear David,
These are all great questions.
ASEG covers more voxels: the segmentations from the HA module are leaner than
their ASEG counterparts (the volumes are very highly correlated, though). This
is because the HA module operates at higher resol
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Eugenio,
You said the T1+T2 would be best. The T2 Nik has is not 1mm isotropic but
the Flair is. Is a FLAIR in general not benifisiol
On Fri, May 18, 2018 at 2:02 PM Anik Dar wrote:
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>
> Hi All,
>
> I have 1x1x3
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Sorry sent that last email by accident. Here is the finished version
Eugenio,
You said the T1+T2 would be best. The T2 Nik has is not 1mm isotropic but
the Flair is. Is a FLAIR in general not beneficial. Can you please
elaborate.
On Tue, Jun 25, 2019
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1x1x3 is a no-no.
The 1x1x1 FLAIR may or may not help; it’s hard to tell (especially without
seeing the images!).
But I would try both T1 and T1+FLAIR, and see what happens ;-)
--
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and
External Email - Use CautionDear there,I tried to process "recon-all -s -localGI"But, there were messages below.Thank you.- < M A T L A B (R) > Copyright 1984-2017 The Mat
