Re: [Freesurfer] Some questions about mris_make_template and downsample

2019-05-28 Thread Bruce Fischl
Hi Jingyue can you explain what your goal is in a bit more detail? My guess is you can use the existing atlas/template and not create a new one. As for the gifti conversion, I think mris_convert can handle it cheers Bruce On Tue, 28 May 2019, Jingyue Zhang wrote: External Email

[Freesurfer] "MATLAB: Undefined variable" error, FSFAST Tutorial, using Octave

2019-05-28 Thread Zacharie Saint-Georges
External Email - Use Caution Dear Freesurfer Developers, I am running into a "MATLAB: Undefined variable" error while doing the FSFAST tutorial, using Ubuntu 18.04, Freesurfer v6, and Octave***. I did try a few solutions posted already (please see links below), but I still cann

Re: [Freesurfer] Some questions about mris_make_template and downsample

2019-05-28 Thread Jingyue Zhang
External Email - Use Caution Dear Bruce: Sorry I forget to tell you I'm using the gifti format 40 subjects dHCP data, so these are neonatal data, I guess existing atlas like fsaverage may not work well. So I want to create my own reference template and project the fMRI data o