Re: [Freesurfer] Recon-all - mghRead could not read rawavg.mgz

2018-12-01 Thread Batuhan Erkat
External Email - Use Caution I will ask our admin to do so. I also don't have any problems on my personal computer, so my T1 image should be fine, but the problem starts at mri_convert function, which surprisingly gives no error. Is it possible for you to look at the 001.mgz and ra

[Freesurfer] ?????? ?????? Triangular mesh sampling problem

2018-12-01 Thread 1013364183
External Email - Use Caution Dear Bruce, I use mri_surf2surf to map lh.thickness from high resolution to low resolution, and vice versa, can this statement implement the operation of Figure 2(a)? yours yujunjie -- -- ??: "Bruce F

Re: [Freesurfer] ?????? ?????? Triangular mesh sampling problem

2018-12-01 Thread Bruce Fischl
Hi yujunjie can you explain what your goal is? I'm not really sure that I understand. cheers Bruce On Sat, 1 Dec 2018, 1013364183 wrote: External Email - Use Caution Dear Bruce,   I use mri_surf2surf to map lh.thickness from high resolution to low resolution, and vice vers

Re: [Freesurfer] Exited with errors-No such file or directory

2018-12-01 Thread Bruce Fischl
Hi Andrade have you checked the Talairach transform? The recon logfile shows: TalAviQA: 0.90309 z-score: -17 WARNING: Talairach QA check failed! z-score of -17 is <= threshold of -9\n \nManual Talairach alignment may be necessary, or include the -notal-check flag to skip this test, making sure t

Re: [Freesurfer] ?????? ?????? Triangular mesh sampling problem

2018-12-01 Thread Bruce Fischl
hmm, maybe Jon (ccd) can help? Bruce On Sat, 1 Dec 2018, 1013364183 wrote: External Email - Use Caution Dear Bruce,   I use mri_surf2surf to map lh.thickness from high resolution to low resolution, and vice versa, can this statement implement the operation of Figure 2(a)? yo

[Freesurfer] ?????? ?????? ?????? Triangular mesh sampling problem

2018-12-01 Thread 1013364183
External Email - Use Caution Dear Bruce, How should I contact Jon (ccd)?Can mri_surf2surf really implement Figure 2(a)? yours yujunjie -- -- ??: "Bruce Fischl"; : 2018??12??2??(??) 0:07 ??: "Freesurfer support

Re: [Freesurfer] ?????? ?????? ?????? Triangular mesh sampling problem

2018-12-01 Thread Bruce Fischl
Hi yujunjie I included him in the previous (and this) email cheers Bruce On Sun, 2 Dec 2018, 1013364183 wrote: External Email - Use Caution Dear Bruce,   How should I contact Jon (ccd)?Can mri_surf2surf really implement Figure 2(a)? yours yujunjie -- ?

[Freesurfer] ?????? ?????? ?????? ?????? Triangular mesh samplingproblem

2018-12-01 Thread 1013364183
External Email - Use Caution Dear Bruce, Thank you very much for your help. yours yujunjie -- -- ??: "Bruce Fischl"; : 2018??12??2??(??) 0:28 ??: "Freesurfer support list"; : "Jonathan Polimeni"; : Re