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Hi everybody,
I was wondering if you could help me.
I run a hyppocampal segmentation in a subject and it seemed to work. Now when
I'm trying to extract the infos and run "quantifyHippocampalSubfields.sh" I
just get this message:
Gathering results
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Dear experts,
I would like to show the across-subject overlap of voxels by creating a map
with color coding indicating the number of subjects activating
corresponding voxels.
For each subject I have run the first level model in spss and saved the
1000
Hi Elisa
if you only use --s fsaverage, then mri_surf2surf assumes you are mapping
within subject. If you want to map from one subject to another you need
to use --srcsubject sub01 --trgsubject fsaverage
And yes, if you get that working I think fscalc should do the trick (or it
would be easy
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I am a bit puzzled. I am running freesurfer 5.3 HCP on ubuntu 14.04. I am
getting an error, see below
I am using the command
recon-all -s BOLD-52_v1 -mprage -autorecon2
This has happened before. What did I do wrong.
#@# ASeg Stats Fri Jul 13 12:55:
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Did you run the preceding steps of FreeSurfer? Does that file exist?
Peace,
Matt.
From:
mailto:freesurfer-boun...@nmr.mgh.harvard.edu>>
on behalf of Aaron Tanenbaum
mailto:aaron.b.tanenb...@gmail.com>>
Reply-To: Freesurfer support list
mailto:Fr
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Yes, I first ran autorecon1 and 2 for the initial processing. I then made
only made brainmask edits followed by running it with autorecon2. The thing
is that according to this URL
> https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable
>
The ribb
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I just noticed that this problem is a now and resolved. I just have to
replace the mri_segstats.
Thank you for your time.
On Fri, Jul 13, 2018 at 6:08 PM Aaron Tanenbaum
wrote:
> Yes, I first ran autorecon1 and 2 for the initial processing. I then m
